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GNPDA2 glucosamine-6-phosphate deaminase 2 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103074951, updated on 11-Mar-2024

Summary

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Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006776226.1 (140672..168454)

NW_006776226.1Genomic Context describing neighboring genes Neighboring gene GTP binding elongation factor GUF1 Neighboring gene Yip1 domain family member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006776226 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006776226.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    140672..168454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007450298.1 → XP_007450360.1  glucosamine-6-phosphate isomerase 2

    See identical proteins and their annotated locations for XP_007450360.1

    UniProtKB/TrEMBL
    A0A340WU00
    Conserved Domains (1) summary
    cl00339
    Location:1 → 183
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  2. XM_007450297.1 → XP_007450359.1  glucosamine-6-phosphate isomerase 2

    See identical proteins and their annotated locations for XP_007450359.1

    UniProtKB/TrEMBL
    A0A340WTF3
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional
Nucleotide Protein
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