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BCL9 BCL9 transcription coactivator [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103072959, updated on 11-Mar-2024

Summary

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Gene symbol
BCL9
Gene description
BCL9 transcription coactivator
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006786767.1 (634430..722474, complement)

NW_006786767.1Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 5 Neighboring gene acid phosphatase 6, lysophosphatidic Neighboring gene olfactory receptor 5V1-like Neighboring gene chromodomain helicase DNA binding protein 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006786767 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell CLL/lymphoma 9 protein
Names
B cell CLL/lymphoma 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006786767.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    634430..722474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007459374.1 → XP_007459436.1  B-cell CLL/lymphoma 9 protein

    UniProtKB/TrEMBL
    A0A340XDB6
    Conserved Domains (2) summary
    pfam04959
    Location:1091 → 1182
    ARS2; Arsenite-resistance protein 2
    pfam11502
    Location:350 → 388
    BCL9; B-cell lymphoma 9 protein
Nucleotide Protein
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