U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PGS1 phosphatidylglycerophosphate synthase 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103071130, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PGS1
Gene description
phosphatidylglycerophosphate synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PGS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006789046.1 (3327420..3361020, complement)

NW_006789046.1Genomic Context describing neighboring genes Neighboring gene cytohesin 1 Neighboring gene dynein axonemal heavy chain 17 Neighboring gene suppressor of cytokine signaling 3 Neighboring gene TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006789046 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006789046.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    3327420..3361020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007462361.1 → XP_007462423.1  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

    See identical proteins and their annotated locations for XP_007462423.1

    UniProtKB/TrEMBL
    A0A340XLV9
    Conserved Domains (3) summary
    cd09135
    Location:96 → 269
    PLDc_PGS1_euk_1; Catalytic domain, repeat 1, of eukaryotic PhosphatidylGlycerophosphate Synthases
    cd09137
    Location:349 → 508
    PLDc_PGS1_euk_2; Catalytic domain, repeat 2, of eukaryotic phosphatidylglycerophosphate synthases
    pfam13091
    Location:113 → 268
    PLDc_2; PLD-like domain

  2. XM_007462362.1 → XP_007462424.1  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

    See identical proteins and their annotated locations for XP_007462424.1

    UniProtKB/TrEMBL
    A0A340XLV9
    Conserved Domains (3) summary
    cd09135
    Location:96 → 269
    PLDc_PGS1_euk_1; Catalytic domain, repeat 1, of eukaryotic PhosphatidylGlycerophosphate Synthases
    cd09137
    Location:349 → 508
    PLDc_PGS1_euk_2; Catalytic domain, repeat 2, of eukaryotic phosphatidylglycerophosphate synthases
    pfam13091
    Location:113 → 268
    PLDc_2; PLD-like domain

  3. XM_007462363.1 → XP_007462425.1  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A340XTK0
    Conserved Domains (3) summary
    cd09135
    Location:96 → 243
    PLDc_PGS1_euk_1; Catalytic domain, repeat 1, of eukaryotic PhosphatidylGlycerophosphate Synthases
    cd09137
    Location:323 → 482
    PLDc_PGS1_euk_2; Catalytic domain, repeat 2, of eukaryotic phosphatidylglycerophosphate synthases
    COG1502
    Location:95 → 521
    Cls; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase or related enzyme [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.