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CDHR1 cadherin related family member 1 [ Python bivittatus (Burmese python) ]

Gene ID: 103052009, updated on 11-Mar-2024

Summary

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Gene symbol
CDHR1
Gene description
cadherin related family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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See CDHR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532063.1 (63523..113826)

NW_006532063.1Genomic Context describing neighboring genes Neighboring gene growth hormone inducible transmembrane protein Neighboring gene uncharacterized LOC107326166 Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 2 Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532063 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-related family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532063.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    63523..113826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007420807.2 → XP_007420869.1  cadherin-related family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A9F2KTH2
    Conserved Domains (1) summary
    cd11304
    Location:141 → 244
    Cadherin_repeat; Cadherin tandem repeat domain

  2. XM_025167666.1 → XP_025023434.1  cadherin-related family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5MRV0
    Conserved Domains (1) summary
    cd11304
    Location:141 → 244
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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