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VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [ Python bivittatus (Burmese python) ]

Gene ID: 103048854, updated on 11-Mar-2024

Summary

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Gene symbol
VIPAS39
Gene description
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006533687.1 (2307..26880, complement)

NW_006533687.1Genomic Context describing neighboring genes Neighboring gene activator of HSP90 ATPase activity 1 Neighboring gene isthmin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006533687 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-defective protein 39 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006533687.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    2307..26880 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007431333.3 → XP_007431395.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for XP_007431395.1

    UniProtKB/TrEMBL
    A0A9F2QZ84
    Conserved Domains (1) summary
    pfam09787
    Location:26 → 468
    Golgin_A5; Golgin subfamily A member 5

  2. XM_007431334.3 → XP_007431396.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for XP_007431396.1

    UniProtKB/TrEMBL
    A0A9F2QZ84
    Conserved Domains (1) summary
    pfam09787
    Location:26 → 468
    Golgin_A5; Golgin subfamily A member 5

  3. XM_007431336.3 → XP_007431398.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for XP_007431398.1

    UniProtKB/TrEMBL
    A0A9F2QZ84
    Conserved Domains (1) summary
    pfam09787
    Location:26 → 468
    Golgin_A5; Golgin subfamily A member 5
Nucleotide Protein
Heading Accession and Version

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