U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

aebp1b AE binding protein 1b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103043923, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
aebp1b
Gene description
AE binding protein 1b
See related
EnsemblRapid:ENSAMXG00025005805
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
si:ch1073-459j12.1
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See aebp1b in Genome Data Viewer
Location:
chromosome: 12
Exon count:
22
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 12 NC_064419.1 (31915747..31935448, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 6 NC_035902.1 (30100757..30121117)

Chromosome 12 - NC_064419.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 157 Neighboring gene splicing factor 3a, subunit 1 Neighboring gene polymerase (DNA directed), delta 2, regulatory subunit Neighboring gene ELMO/CED-12 domain containing 3 Neighboring gene steroidogenic acute regulatory protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inactive carboxypeptidase-like protein X2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064419.1 Reference AstMex3_surface

    Range
    31915747..31935448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007247099.4 → XP_007247161.3  inactive carboxypeptidase-like protein X2 isoform X2

    UniProtKB/TrEMBL
    A0A8T2LL97

  2. XM_007247097.4 → XP_007247159.3  inactive carboxypeptidase-like protein X2 isoform X1

    UniProtKB/TrEMBL
    A0A8T2LL97
    Related
    ENSAMXP00025008308.1, ENSAMXT00025011385.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases