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hus1 HUS1 checkpoint clamp component [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103033643, updated on 11-Mar-2024

Summary

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Gene symbol
hus1
Gene description
HUS1 checkpoint clamp component
See related
EnsemblRapid:ENSAMXG00025003889
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See hus1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (108685410..108695661, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (8149000..8159475)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene intermembrane lipid transfer protein VPS13B Neighboring gene nebulette-like Neighboring gene receptor activity-modifying protein 3 Neighboring gene ankyrin repeat and SAM domain-containing protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic DNA integrity checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA replication checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of checkpoint clamp complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
checkpoint protein HUS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    108685410..108695661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022679842.2 → XP_022535563.1  checkpoint protein HUS1 isoform X1

    UniProtKB/TrEMBL
    W5L6K6
    Related
    ENSAMXP00025005172.1, ENSAMXT00025007193.1
    Conserved Domains (1) summary
    pfam04005
    Location:1 → 283
    Hus1; Hus1-like protein

  2. XM_022679846.2 → XP_022535567.1  checkpoint protein HUS1 isoform X2

    UniProtKB/TrEMBL
    A0A8T2MGL5
    Conserved Domains (1) summary
    pfam04005
    Location:2 → 245
    Hus1; Hus1-like protein
Nucleotide Protein
Heading Accession and Version

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