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rps6ka3b ribosomal protein S6 kinase, polypeptide 3b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103021949, updated on 6-Jun-2024

Summary

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Gene symbol
rps6ka3b
Gene description
ribosomal protein S6 kinase, polypeptide 3b
See related
EnsemblRapid:ENSAMXG00025034006
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
rps6ka3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (96814410..96883830, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (21499587..21588406)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 24 Neighboring gene eukaryotic translation initiation factor 1A X-linked b Neighboring gene pyruvate dehydrogenase E1 subunit alpha 1b Neighboring gene YTH N6-methyladenosine RNA binding protein F3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosomal protein S6 kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal protein S6 kinase alpha-3
Names
ribosomal protein S6 kinase A3
ribosomal protein S6 kinase, 90kDa, polypeptide 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    96814410..96883830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007248954.4 → XP_007249016.2  ribosomal protein S6 kinase alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A8B9JU79
    Conserved Domains (2) summary
    cd05582
    Location:74 → 390
    STKc_RSK_N; N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase
    cl21453
    Location:403 → 740
    PKc_like; Protein Kinases, catalytic domain

  2. XM_007248956.4 → XP_007249018.2  ribosomal protein S6 kinase alpha-3 isoform X4

    UniProtKB/TrEMBL
    A0A8B9JU79
    Related
    ENSAMXP00025062310.1, ENSAMXT00025078877.1
    Conserved Domains (2) summary
    cd05582
    Location:70 → 386
    STKc_RSK_N; N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase
    cl21453
    Location:399 → 737
    PKc_like; Protein Kinases, catalytic domain

  3. XM_007248953.4 → XP_007249015.2  ribosomal protein S6 kinase alpha-3 isoform X1

    UniProtKB/TrEMBL
    A0A8B9JU79
    Related
    ENSAMXP00025062320.1, ENSAMXT00025078887.1
    Conserved Domains (2) summary
    cd05582
    Location:74 → 390
    STKc_RSK_N; N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase
    cl21453
    Location:403 → 741
    PKc_like; Protein Kinases, catalytic domain

  4. XM_007248957.4 → XP_007249019.2  ribosomal protein S6 kinase alpha-3 isoform X5

    UniProtKB/TrEMBL
    A0A8B9JTZ0
    Related
    ENSAMXP00025062279.1, ENSAMXT00025078846.1
    Conserved Domains (2) summary
    cd05582
    Location:47 → 363
    STKc_RSK_N; N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase
    cl21453
    Location:376 → 714
    PKc_like; Protein Kinases, catalytic domain

  5. XM_007248955.4 → XP_007249017.3  ribosomal protein S6 kinase alpha-3 isoform X3

    UniProtKB/TrEMBL
    A0A8B9JU40
    Related
    ENSAMXP00025062268.1, ENSAMXT00025078835.1

  6. XM_007248958.4 → XP_007249020.2  ribosomal protein S6 kinase alpha-3 isoform X6

    UniProtKB/TrEMBL
    A0A8B9JWR1
    Related
    ENSAMXP00025062290.1, ENSAMXT00025078857.1
    Conserved Domains (2) summary
    cd05582
    Location:35 → 351
    STKc_RSK_N; N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase
    cd14176
    Location:364 → 702
    STKc_RSK2_C; C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called 90kDa ribosomal protein S6 kinase 3 or Ribosomal protein S6 kinase alpha-3)
Nucleotide Protein
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