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gja3 gap junction protein, alpha 3 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103021763, updated on 11-Mar-2024

Summary

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Gene symbol
gja3
Gene description
gap junction protein, alpha 3
See related
EnsemblRapid:ENSAMXG00025016709
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 11 NC_064418.1 (25272273..25275580, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 19 NC_035915.1 (21637779..21642048, complement)

Chromosome 11 - NC_064418.1Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 8 Neighboring gene zinc finger, MYM-type 2 Neighboring gene gap junction protein beta 8 Neighboring gene crystallin, lambda 1 Neighboring gene intraflagellar transport 88 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: gap junction alpha-3 protein
Names
gap junction protein, alpha 3, 46kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064418.1 Reference AstMex3_surface

    Range
    25272273..25275580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022680444.2 → XP_022536165.1  LOW QUALITY PROTEIN: gap junction alpha-3 protein

    UniProtKB/TrEMBL
    A0A8B9H0I5
    Related
    ENSAMXP00025019764.1, ENSAMXT00025029647.1
    Conserved Domains (2) summary
    pfam00029
    Location:3 → 254
    Connexin
    pfam16791
    Location:291 → 444
    Connexin40_C; Connexin 40 C-terminal domain
Nucleotide Protein
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