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TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103020776, updated on 6-Jun-2024

Summary

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Gene symbol
TOPORS
Gene description
TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 6 NC_080069.1 (44644508..44654995)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006726353.1 (22591871..22602595, complement)

Chromosome 6 - NC_080069.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene NADH:ubiquinone oxidoreductase subunit B6 Neighboring gene small integral membrane protein 27 Neighboring gene RNA sensor RIG-I Neighboring gene aconitase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein monoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Topors

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080069.1 Reference mBalAcu1.1

    Range
    44644508..44654995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007176848.3 → XP_007176910.2  E3 ubiquitin-protein ligase Topors isoform X1

    UniProtKB/TrEMBL
    A0A383ZP76

  2. XM_057548345.1 → XP_057404328.1  E3 ubiquitin-protein ligase Topors isoform X2

    UniProtKB/TrEMBL
    A0A383ZP76

  3. XM_057548344.1 → XP_057404327.1  E3 ubiquitin-protein ligase Topors isoform X2

    UniProtKB/TrEMBL
    A0A383ZP76
Nucleotide Protein
Heading Accession and Version

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