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PRKD1 protein kinase D1 [ Physeter catodon (sperm whale) ]

Gene ID: 102987793, updated on 10-Mar-2024

Summary

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Gene symbol
PRKD1
Gene description
protein kinase D1
See related
Ensembl:ENSPCTG00005006240
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 11 NC_041224.1 (112979977..113320428, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 11 NC_041224.1 (112979977..113320436, complement)

Chromosome 11 - NC_041224.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129392585 Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene thioredoxin reductase-like selenoprotein T Neighboring gene 40S ribosomal protein S6-like Neighboring gene 40S ribosomal protein SA-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041224.1 Reference ASM283717v5 Primary Assembly

    Range
    112979977..113320428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028495666.2 → XP_028351467.1  serine/threonine-protein kinase D1 isoform X1

    UniProtKB/TrEMBL
    A0A455BRX6
    Related
    ENSPCTP00005008856.1, ENSPCTT00005009754.1
    Conserved Domains (4) summary
    cd00029
    Location:275 → 324
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:420 → 547
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:583 → 842
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:147 → 192
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

  2. XM_024134023.3 → XP_023989791.1  serine/threonine-protein kinase D1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9TFV5
    Related
    ENSPCTP00005008881.1, ENSPCTT00005009781.1
    Conserved Domains (4) summary
    cd00029
    Location:267 → 316
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:412 → 539
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:575 → 834
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:147 → 192
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

  3. XM_055088374.1 → XP_054944349.1  serine/threonine-protein kinase D1 isoform X3

    UniProtKB/TrEMBL
    A0A9W2WYU1

  4. XM_028495668.2 → XP_028351469.1  serine/threonine-protein kinase D1 isoform X5

    UniProtKB/TrEMBL
    A0A455BR79
    Conserved Domains (4) summary
    cd00029
    Location:163 → 212
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:308 → 435
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:471 → 730
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:35 → 80
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

  5. XM_055088375.1 → XP_054944350.1  serine/threonine-protein kinase D1 isoform X4

    UniProtKB/TrEMBL
    A0A9W2WYZ5
Nucleotide Protein
Heading Accession and Version

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