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DENND1C DENN domain containing 1C [ Physeter catodon (sperm whale) ]

Gene ID: 102987216, updated on 10-Mar-2024

Summary

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Gene symbol
DENND1C
Gene description
DENN domain containing 1C
See related
Ensembl:ENSPCTG00005010606
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145771.1 (28886..36098)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145771.1 (28886..36136)

NW_021145771.1Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase 3-like Neighboring gene tubulin beta 4A class IVa Neighboring gene crumbs cell polarity complex component 3 Neighboring gene solute carrier family 25 member 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DENN domain-containing protein 1C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145771.1 Reference ASM283717v5 Primary Assembly

    Range
    28886..36098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028485625.2 → XP_028341426.1  DENN domain-containing protein 1C

    UniProtKB/TrEMBL
    A0A455BBS6
    Related
    ENSPCTP00005015156.1, ENSPCTT00005016759.1
    Conserved Domains (4) summary
    smart00801
    Location:281 → 347
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:49 → 249
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 43
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    PHA03247
    Location:546 → 727
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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