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NUP43 nucleoporin 43 [ Physeter catodon (sperm whale) ]

Gene ID: 102983531, updated on 10-Mar-2024

Summary

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Gene symbol
NUP43
Gene description
nucleoporin 43
See related
Ensembl:ENSPCTG00005007117
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 10 NC_041223.1 (16176844..16189268)
102 previous assembly ASM283717v2 (GCF_002837175.2) 10 NC_041223.1 (16176839..16189844)

Chromosome 10 - NC_041223.1Genomic Context describing neighboring genes Neighboring gene transcriptional adapter 2-alpha-like Neighboring gene LDL receptor related protein 11 Neighboring gene protein-L-isoaspartate (D-aspartate) O-methyltransferase Neighboring gene uncharacterized LOC129392458 Neighboring gene large tumor suppressor kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin Nup43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041223.1 Reference ASM283717v5 Primary Assembly

    Range
    16176844..16189268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024122426.3 → XP_023978194.1  nucleoporin Nup43

    UniProtKB/TrEMBL
    A0A2Y9SR26
    Related
    ENSPCTP00005010016.1, ENSPCTT00005011078.1
    Conserved Domains (2) summary
    sd00039
    Location:78 → 133
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:73 → 294
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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