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RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Panthera tigris (tiger) ]

Gene ID: 102956076, updated on 10-Mar-2024

Summary

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Gene symbol
RFNG
Gene description
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E1
Exon count:
9
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E1 NC_056673.1 (60283457..60287296, complement)

Chromosome E1 - NC_056673.1Genomic Context describing neighboring genes Neighboring gene carbonyl reductase [NADPH] 2-like Neighboring gene uncharacterized LOC122233539 Neighboring gene G protein pathway suppressor 1 Neighboring gene dihydrouridine synthase 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056673.1 Chromosome E1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056673.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    60283457..60287296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042966571.1 → XP_042822505.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X2

    Conserved Domains (1) summary
    pfam02434
    Location:60 → 310
    Fringe; Fringe-like

  2. XM_042966569.1 → XP_042822503.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1

    Conserved Domains (1) summary
    pfam02434
    Location:60 → 359
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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