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LSS lanosterol synthase [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102946034, updated on 10-Mar-2024

Summary

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Gene symbol
LSS
Gene description
lanosterol synthase
See related
EnsemblRapid:ENSCMYG00015015004
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
22
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 11 NC_051251.2 (75745164..75772980, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 11 NC_051251.1 (3749331..3776325)

Chromosome 11 - NC_051251.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119563579 Neighboring gene formimidoyltransferase cyclodeaminase Neighboring gene uncharacterized LOC122462495 Neighboring gene uncharacterized LOC122462501 Neighboring gene uncharacterized LOC122462496 Neighboring gene S100 calcium binding protein B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lanosterol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lanosterol synthase
Names
lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051251.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    75745164..75772980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037912579.2 → XP_037768507.1  lanosterol synthase

    Related
    ENSCMYP00015023062.1, ENSCMYT00015028185.1
    Conserved Domains (1) summary
    cd02892
    Location:78 → 720
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...
Nucleotide Protein
Heading Accession and Version

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