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SMG9 SMG9 nonsense mediated mRNA decay factor [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102944360, updated on 10-Mar-2024

Summary

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Gene symbol
SMG9
Gene description
SMG9 nonsense mediated mRNA decay factor
Locus tag
UY3_02209
See related
EnsemblRapid:ENSCMYG00015012054
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See SMG9 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
17
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 24 NC_051264.2 (17135034..17145196)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 21 NC_051261.1 (17135175..17145196)

Chromosome 24 - NC_051264.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102945458 Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene uncharacterized LOC119564184 Neighboring gene uncharacterized LOC102943689 Neighboring gene immunity related GTPase cinema

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SMG9
Names
Protein SMG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051264.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    17135034..17145196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037883275.2 → XP_037739203.1  protein SMG9 isoform X1

    Related
    ENSCMYP00015018675.1, ENSCMYT00015022668.1

  2. XM_043535201.1 → XP_043391136.1  protein SMG9 isoform X1

  3. XM_043535202.1 → XP_043391137.1  protein SMG9 isoform X2

  4. XM_043535203.1 → XP_043391138.1  protein SMG9 isoform X3

Nucleotide Protein
Heading Accession and Version

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