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CYFIP2 cytoplasmic FMR1 interacting protein 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941259, updated on 10-Mar-2024

Summary

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Gene symbol
CYFIP2
Gene description
cytoplasmic FMR1 interacting protein 2
Locus tag
UY3_05749
See related
EnsemblRapid:ENSCMYG00015017652
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
31
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (3261795..3336865, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (3260405..3336865, complement)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 19 Neighboring gene 40S ribosomal protein S25-like Neighboring gene NIPA like domain containing 4 Neighboring gene fibronectin type III domain containing 9 Neighboring gene IL2 inducible T cell kinase Neighboring gene mediator complex subunit 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell projection assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic FMR1-interacting protein 2
Names
Cytoplasmic FMR1-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    3261795..3336865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037906539.2 → XP_037762467.1  cytoplasmic FMR1-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    M7BMU5
    Related
    ENSCMYP00015027030.1, ENSCMYT00015033183.1
    Conserved Domains (2) summary
    pfam05994
    Location:387 → 1220
    FragX_IP; Cytoplasmic Fragile-X interacting family
    pfam07159
    Location:65 → 267
    DUF1394; Protein of unknown function (DUF1394)

  2. XM_037906538.2 → XP_037762466.1  cytoplasmic FMR1-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    M7BMU5
    Conserved Domains (2) summary
    pfam05994
    Location:388 → 1221
    FragX_IP; Cytoplasmic Fragile-X interacting family
    pfam07159
    Location:65 → 267
    DUF1394; Protein of unknown function (DUF1394)
Nucleotide Protein
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