U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPH3A rabphilin 3A [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941032, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RPH3A
Gene description
rabphilin 3A
Locus tag
UY3_05671
See related
EnsemblRapid:ENSCMYG00015000653
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPH3A in Genome Data Viewer
Location:
chromosome: 15
Exon count:
31
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 15 NC_057856.1 (28162586..28271816)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 15 NC_051255.1 (28162902..28271798)

Chromosome 15 - NC_057856.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 11 Neighboring gene uncharacterized LOC122463066 Neighboring gene WSC domain containing 2 Neighboring gene chemerin chemokine-like receptor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rabphilin-3A
Names
Rabphilin-3A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057856.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    28162586..28271816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043529506.1 → XP_043385441.1  rabphilin-3A isoform X4

    Conserved Domains (4) summary
    cd04035
    Location:533 → 656
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:692 → 824
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PRK07764
    Location:265 → 468
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd15762
    Location:192 → 269
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  2. XM_043529504.1 → XP_043385439.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  3. XM_043529503.1 → XP_043385438.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  4. XM_043529505.1 → XP_043385440.1  rabphilin-3A isoform X3

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:436 → 559
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:595 → 727
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:153 → 392
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  5. XM_037878900.2 → XP_037734828.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  6. XM_037878907.2 → XP_037734835.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  7. XM_043529516.1 → XP_043385451.1  rabphilin-3A isoform X7

    UniProtKB/TrEMBL
    M7BN39
    Related
    ENSCMYP00015000867.1, ENSCMYT00015001200.1
    Conserved Domains (4) summary
    cd04035
    Location:432 → 555
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:591 → 723
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:149 → 388
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  8. XM_043529511.1 → XP_043385446.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  9. XM_043529514.1 → XP_043385449.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Related
    ENSCMYP00015000868.1, ENSCMYT00015001201.1
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  10. XM_037878894.2 → XP_037734822.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  11. XM_043529513.1 → XP_043385448.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  12. XM_037878899.2 → XP_037734827.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  13. XM_037878906.2 → XP_037734834.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  14. XM_037878905.2 → XP_037734833.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  15. XM_037878897.2 → XP_037734825.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  16. XM_043529517.1 → XP_043385452.1  rabphilin-3A isoform X7

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:432 → 555
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:591 → 723
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:149 → 388
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  17. XM_037878898.2 → XP_037734826.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  18. XM_037878893.2 → XP_037734821.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  19. XM_037878903.2 → XP_037734831.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  20. XM_037878896.2 → XP_037734824.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  21. XM_037878895.2 → XP_037734823.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  22. XM_037878902.2 → XP_037734830.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  23. XM_037878908.2 → XP_037734836.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  24. XM_037878901.2 → XP_037734829.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  25. XM_043529512.1 → XP_043385447.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  26. XM_043529509.1 → XP_043385444.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  27. XM_043529508.1 → XP_043385443.1  rabphilin-3A isoform X2

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:446 → 569
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:605 → 737
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:163 → 402
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:91 → 168
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  28. XM_043529507.1 → XP_043385442.1  rabphilin-3A isoform X1

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:450 → 573
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:609 → 741
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:167 → 405
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:95 → 172
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  29. XM_037878891.2 → XP_037734819.2  rabphilin-3A isoform X6

    Conserved Domains (4) summary
    cd04035
    Location:479 → 602
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:638 → 770
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:196 → 434
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:124 → 201
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins

  30. XM_037878890.2 → XP_037734818.2  rabphilin-3A isoform X5

    UniProtKB/TrEMBL
    M7BN39
    Conserved Domains (4) summary
    cd04035
    Location:462 → 585
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:621 → 753
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    PHA03307
    Location:179 → 418
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15762
    Location:107 → 184
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.