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USP46 ubiquitin specific peptidase 46 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102940345, updated on 10-Mar-2024

Summary

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Gene symbol
USP46
Gene description
ubiquitin specific peptidase 46
Locus tag
UY3_17776
See related
EnsemblRapid:ENSCMYG00015000281
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (90865457..90898160)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (90865463..90897003)

Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene RAS like family 11 member B Neighboring gene uncharacterized LOC114022200 Neighboring gene small nucleolar RNA SNORA26 Neighboring gene spermatogenesis associated 18 Neighboring gene sarcoglycan beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 46
Names
Ubiquitin carboxyl-terminal hydrolase 46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    90865457..90898160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037897794.2 → XP_037753722.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X2

    UniProtKB/TrEMBL
    M7AQJ7
    Related
    ENSCMYP00015000340.1, ENSCMYT00015000486.1
    Conserved Domains (1) summary
    cd02663
    Location:49 → 376
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  2. XM_037897792.2 → XP_037753720.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X1

    UniProtKB/TrEMBL
    M7AQJ7
    Related
    ENSCMYP00015000339.1, ENSCMYT00015000485.1
    Conserved Domains (1) summary
    cd02663
    Location:51 → 378
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

  3. XM_037897795.2 → XP_037753723.1  ubiquitin carboxyl-terminal hydrolase 46 isoform X3

    UniProtKB/TrEMBL
    M7AQJ7
    Related
    ENSCMYP00015000337.1, ENSCMYT00015000483.1
    Conserved Domains (1) summary
    cd02663
    Location:26 → 349
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
Nucleotide Protein
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