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RNF43 ring finger protein 43 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102937671, updated on 10-Mar-2024

Summary

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Gene symbol
RNF43
Gene description
ring finger protein 43
See related
EnsemblRapid:ENSCMYG00015000400
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 17 NC_051257.2 (23140461..23272003, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 17 NC_051257.1 (1931830..2060144)

Chromosome 17 - NC_051257.2Genomic Context describing neighboring genes Neighboring gene TSPO associated protein 1 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene heat shock transcription factor 5 Neighboring gene uncharacterized LOC122463202

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051257.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    23140461..23272003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027830405.3 → XP_027686206.2  E3 ubiquitin-protein ligase RNF43

    UniProtKB/TrEMBL
    M7ARD3
    Related
    ENSCMYP00015000558.1, ENSCMYT00015000705.1
    Conserved Domains (2) summary
    cd16798
    Location:262 → 308
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    pfam18212
    Location:81 → 183
    ZNRF_3_ecto; ZNRF-3 Ectodomain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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