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DNAJC1 DnaJ heat shock protein family (Hsp40) member C1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102936037, updated on 10-Mar-2024

Summary

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Gene symbol
DNAJC1
Gene description
DnaJ heat shock protein family (Hsp40) member C1
See related
EnsemblRapid:ENSCMYG00015024932
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See DNAJC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (225640870..225835120, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (225640727..225835109, complement)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114019188 Neighboring gene SKI/DACH domain containing 1 Neighboring gene MLLT10 histone lysine methyltransferase DOT1L cofactor Neighboring gene uncharacterized LOC122464747 Neighboring gene transfer RNA asparagine (anticodon GUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    225640870..225835120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037890839.2 → XP_037746767.1  dnaJ homolog subfamily C member 1 isoform X2

    Related
    ENSCMYP00015038059.1, ENSCMYT00015046870.1
    Conserved Domains (2) summary
    cd00167
    Location:488 → 534
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam00226
    Location:44 → 105
    DnaJ; DnaJ domain

  2. XM_043541316.1 → XP_043397251.1  dnaJ homolog subfamily C member 1 isoform X1

    Related
    ENSCMYP00015038063.1, ENSCMYT00015046876.1
    Conserved Domains (2) summary
    cd00167
    Location:504 → 550
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    TIGR02349
    Location:45 → 105
    DnaJ_bact; chaperone protein DnaJ
Nucleotide Protein
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