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BRAT1 BRCA1 associated ATM activator 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102931627, updated on 10-Mar-2024

Summary

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Gene symbol
BRAT1
Gene description
BRCA1 associated ATM activator 1
Locus tag
UY3_12231
See related
EnsemblRapid:ENSCMYG00015011975
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 10 NC_051250.2 (11150786..11168337, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 10 NC_051250.1 (72885995..72903337)

Chromosome 10 - NC_051250.2Genomic Context describing neighboring genes Neighboring gene G protein subunit alpha 12 Neighboring gene archaelysin family metallopeptidase 1 Neighboring gene uncharacterized LOC122461932 Neighboring gene IQ motif containing E Neighboring gene tweety family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BRCA1-associated ATM activator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051250.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    11150786..11168337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007065344.4 → XP_007065406.2  BRCA1-associated ATM activator 1 isoform X1

    UniProtKB/TrEMBL
    M7AYH1
    Related
    ENSCMYP00015018551.1, ENSCMYT00015022519.1
    Conserved Domains (1) summary
    sd00044
    Location:505 → 535
    HEAT; HEAT repeat [structural motif]

  2. XM_043523642.1 → XP_043379577.1  BRCA1-associated ATM activator 1 isoform X1

    UniProtKB/TrEMBL
    M7AYH1
    Conserved Domains (1) summary
    sd00044
    Location:505 → 535
    HEAT; HEAT repeat [structural motif]

  3. XM_037910564.2 → XP_037766492.1  BRCA1-associated ATM activator 1 isoform X2

    UniProtKB/TrEMBL
    M7AYH1
    Conserved Domains (1) summary
    sd00044
    Location:504 → 534
    HEAT; HEAT repeat [structural motif]

  4. XM_043523641.1 → XP_043379576.1  BRCA1-associated ATM activator 1 isoform X1

    UniProtKB/TrEMBL
    M7AYH1
    Conserved Domains (1) summary
    sd00044
    Location:505 → 535
    HEAT; HEAT repeat [structural motif]

  5. XM_037910565.2 → XP_037766493.1  BRCA1-associated ATM activator 1 isoform X3

    UniProtKB/TrEMBL
    M7AYH1
    Related
    ENSCMYP00015018545.1, ENSCMYT00015022510.1
    Conserved Domains (1) summary
    sd00044
    Location:469 → 499
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
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