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OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930928, updated on 10-Mar-2024

Summary

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Gene symbol
OGFOD2
Gene description
2-oxoglutarate and iron dependent oxygenase domain containing 2
Locus tag
UY3_05617
See related
EnsemblRapid:ENSCMYG00015000781
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See OGFOD2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 15 NC_057856.1 (25395672..25407358, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 15 NC_051255.1 (25396004..25407292, complement)

Chromosome 15 - NC_057856.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol transfer protein membrane associated 2 Neighboring gene gypsy retrotransposon integrase-like protein 1 Neighboring gene ARF like GTPase 6 interacting protein 4 Neighboring gene ATP binding cassette subfamily B member 9 Neighboring gene VPS37B subunit of ESCRT-I

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057856.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    25395672..25407358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037878652.2 → XP_037734580.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1

    Related
    ENSCMYP00015001140.1, ENSCMYT00015001473.1
    Conserved Domains (1) summary
    smart00702
    Location:146 → 308
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_043529202.1 → XP_043385137.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X3

    Conserved Domains (1) summary
    smart00702
    Location:66 → 228
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_037878653.2 → XP_037734581.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    smart00702
    Location:133 → 295
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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