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Helt helt bHLH transcription factor [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102909123, updated on 10-Mar-2024

Summary

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Gene symbol
Helt
Gene description
helt bHLH transcription factor
See related
Ensembl:ENSPEMG00000004914
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 17 NC_056024.1 (25730238..25732794)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501043.1 (4572352..4574908, complement)

Chromosome 17 - NC_056024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121823452 Neighboring gene uncharacterized LOC121823453 Neighboring gene solute carrier family 25 member 4 Neighboring gene cilia and flagella associated protein 97

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hairy and enhancer of split-related protein HELT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056024.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    25730238..25732794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006970886.1 → XP_006970948.1  hairy and enhancer of split-related protein HELT isoform X2

    UniProtKB/TrEMBL
    A0A6I9KTL6
    Related
    ENSPEMP00000003456.1, ENSPEMT00000005920.1
    Conserved Domains (2) summary
    pfam00010
    Location:13 → 66
    HLH; Helix-loop-helix DNA-binding domain
    pfam07527
    Location:86 → 126
    Hairy_orange; Hairy Orange

  2. XM_015998843.1 → XP_015854329.1  hairy and enhancer of split-related protein HELT isoform X1

    UniProtKB/TrEMBL
    A0A6J0DH65
    Conserved Domains (2) summary
    pfam00010
    Location:13 → 66
    HLH; Helix-loop-helix DNA-binding domain
    pfam07527
    Location:87 → 127
    Hairy_orange; Hairy Orange
Nucleotide Protein
Heading Accession and Version

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