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HOMER1 homer scaffold protein 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102896696, updated on 30-Mar-2024

Summary

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Gene symbol
HOMER1
Gene description
homer scaffold protein 1
Locus tag
PAL_GLEAN10024931
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436298.1 (12922767..13036348, complement)

NW_006436298.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 60S ribosomal protein L10a pseudogene Neighboring gene junction mediating and regulatory protein, p53 cofactor Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436298 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled glutamate receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled glutamate receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of store-operated calcium entry IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homer protein homolog 1
Names
Homer protein like protein 1
homer homolog 1
homer scaffolding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436298.1 Reference ASM32557v1 Primary Assembly

    Range
    12922767..13036348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006913175.3 → XP_006913237.1  homer protein homolog 1

    See identical proteins and their annotated locations for XP_006913237.1

    UniProtKB/TrEMBL
    L5KIT5
    Conserved Domains (2) summary
    COG1196
    Location:184 → 352
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd01206
    Location:3 → 111
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain
Nucleotide Protein
Heading Accession and Version

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