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ZNF599 zinc finger protein 599 [ Pteropus alecto (black flying fox) ]

Gene ID: 102896252, updated on 30-Mar-2024

Summary

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Gene symbol
ZNF599
Gene description
zinc finger protein 599
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006494614.1 (65265465..65283344, complement)

NW_006494614.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein OZF-like Neighboring gene 5S ribosomal RNA Neighboring gene zinc finger protein 181 Neighboring gene zinc finger protein 599

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494614 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 599

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006494614.1 Reference ASM32557v1 Primary Assembly

    Range
    65265465..65283344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006926797.3 → XP_006926859.1  zinc finger protein 599 isoform X1

    Conserved Domains (6) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:217 → 373
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:253 → 273
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:251 → 273
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:8 → 47
    KRAB; KRAB box
    pfam13465
    Location:349 → 374
    zf-H2C2_2; Zinc-finger double domain

  2. XM_006926798.3 → XP_006926860.1  zinc finger protein 599 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:249 → 381
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:197 → 217
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:195 → 217
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:293 → 318
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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