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ATXN3 ataxin 3 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102874476, updated on 10-Mar-2024

Summary

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Gene symbol
ATXN3
Gene description
ataxin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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See ATXN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399752.1 (43101872..43144998)

NW_006399752.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specific factor 2 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene thyroid hormone receptor interactor 11 Neighboring gene fibulin 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399752 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399752.1 Reference EleEdw1.0

    Range
    43101872..43144998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006879115.1 → XP_006879177.1  ataxin-3

    Conserved Domains (2) summary
    pfam02099
    Location:9 → 163
    Josephin; Josephin
    pfam16619
    Location:265 → 323
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  2. XM_006879116.1 → XP_006879178.1  ataxin-3

    Conserved Domains (2) summary
    pfam02099
    Location:9 → 163
    Josephin; Josephin
    pfam16619
    Location:265 → 290
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3
Nucleotide Protein
Heading Accession and Version

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