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ZMYND11 zinc finger, MYND-type containing 11 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102867956, updated on 22-Oct-2023

Summary

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Gene symbol
ZMYND11
Gene description
zinc finger, MYND-type containing 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399810.1 (15244778..15381879)

NW_006399810.1Genomic Context describing neighboring genes Neighboring gene lupus La protein-like Neighboring gene alcohol dehydrogenase class-3-like Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like Neighboring gene disco interacting protein 2 homolog C Neighboring gene ribosomal protein L6 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399810 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger MYND domain-containing protein 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399810.1 Reference EleEdw1.0

    Range
    15244778..15381879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006887664.1 → XP_006887726.1  zinc finger MYND domain-containing protein 11-like

    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:563 → 598
    zf-MYND; MYND finger

  2. XM_006887665.1 → XP_006887727.1  zinc finger MYND domain-containing protein 11-like

    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:509 → 544
    zf-MYND; MYND finger

  3. XM_006887666.1 → XP_006887728.1  zinc finger MYND domain-containing protein 11-like

    Conserved Domains (3) summary
    cd05841
    Location:217 → 298
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 203
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:508 → 543
    zf-MYND; MYND finger

  4. XM_006887667.1 → XP_006887729.1  zinc finger MYND domain-containing protein 11-like

    Conserved Domains (3) summary
    cd05841
    Location:187 → 268
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    pfam01753
    Location:478 → 513
    zf-MYND; MYND finger
    cl02556
    Location:95 → 173
    Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.

  5. XM_006887668.1 → XP_006887730.1  zinc finger MYND domain-containing protein 11-like

    Conserved Domains (3) summary
    cd05841
    Location:158 → 233
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:64 → 158
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:443 → 478
    zf-MYND; MYND finger
Nucleotide Protein
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