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LLGL1 LLGL scribble cell polarity complex component 1 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102855475, updated on 10-Mar-2024

Summary

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Gene symbol
LLGL1
Gene description
LLGL scribble cell polarity complex component 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006400064.1 (1244234..1260105)

NW_006400064.1Genomic Context describing neighboring genes Neighboring gene myosin XVA Neighboring gene cyclin-dependent kinase 9 pseudogene Neighboring gene alkB homolog 5, RNA demethylase Neighboring gene FLII actin remodeling protein Neighboring gene DNA topoisomerase III alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006400064 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin II binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lethal(2) giant larvae protein homolog 1
Names
LLGL1, scribble cell polarity complex component

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006400064.1 Reference EleEdw1.0

    Range
    1244234..1260105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006901186.1 → XP_006901248.1  lethal(2) giant larvae protein homolog 1

    Conserved Domains (3) summary
    COG2319
    Location:29 → 269
    WD40; WD40 repeat [General function prediction only]
    pfam08366
    Location:280 → 379
    LLGL; LLGL2
    sd00039
    Location:38 → 73
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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