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ASTN2 astrotactin 2 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102819896, updated on 10-Mar-2024

Summary

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Gene symbol
ASTN2
Gene description
astrotactin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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See ASTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408599.1 (7818384..9150051)

NW_006408599.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L34 pseudogene Neighboring gene toll like receptor 4 Neighboring gene tripartite motif containing 32 Neighboring gene pappalysin 1 Neighboring gene 60S ribosomal protein L10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408599 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
astrotactin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408599.1 Reference ChrAsi1.0 Primary Assembly

    Range
    7818384..9150051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006865679.1 → XP_006865741.1  astrotactin-2

    UniProtKB/TrEMBL
    A0A9B0WRY4
    Conserved Domains (2) summary
    smart00457
    Location:807 → 990
    MACPF; membrane-attack complex / perforin
    pfam14670
    Location:658 → 705
    FXa_inhibition; Coagulation Factor Xa inhibitory site

  2. XM_006865678.1 → XP_006865740.1  astrotactin-2

    UniProtKB/TrEMBL
    A0A9B0WSW4
    Conserved Domains (2) summary
    smart00457
    Location:858 → 1041
    MACPF; membrane-attack complex / perforin
    pfam14670
    Location:709 → 756
    FXa_inhibition; Coagulation Factor Xa inhibitory site

  3. XM_006865680.1 → XP_006865742.1  astrotactin-2

    UniProtKB/TrEMBL
    A0A9B0WSL3
    Conserved Domains (2) summary
    smart00457
    Location:497 → 680
    MACPF; membrane-attack complex / perforin
    pfam14670
    Location:348 → 395
    FXa_inhibition; Coagulation Factor Xa inhibitory site

  4. XM_006865681.1 → XP_006865743.1  astrotactin-2

    UniProtKB/TrEMBL
    A0A9B0WR19
    Conserved Domains (1) summary
    cl02616
    Location:1 → 87
    MACPF; MAC/Perforin domain
Nucleotide Protein
Heading Accession and Version

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