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ALX1 ALX homeobox 1 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102817206, updated on 10-Mar-2024

Summary

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Gene symbol
ALX1
Gene description
ALX homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408735.1 (3823723..3847716, complement)

NW_006408735.1Genomic Context describing neighboring genes Neighboring gene RNA-binding motif protein, X chromosome-like Neighboring gene basic transcription factor 3 pseudogene Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene tetraspanin 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408735 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALX homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408735.1 Reference ChrAsi1.0 Primary Assembly

    Range
    3823723..3847716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006872967.1 → XP_006873029.1  ALX homeobox protein 1

    UniProtKB/TrEMBL
    A0A9B0WWV1
    Conserved Domains (2) summary
    pfam00046
    Location:135 → 188
    Homeobox; Homeobox domain
    pfam03826
    Location:302 → 319
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

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