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ABCD2 ATP binding cassette subfamily D member 2 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102813437, updated on 11-Apr-2024

Summary

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Gene symbol
ABCD2
Gene description
ATP binding cassette subfamily D member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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See ABCD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408595.1 (2469227..2543258, complement)

NW_006408595.1Genomic Context describing neighboring genes Neighboring gene zinc finger SWIM domain-containing protein 7-like Neighboring gene iron-sulfur cluster assembly enzyme pseudogene Neighboring gene kinesin family member 21A Neighboring gene regulator of DNA class I crossover intermediates 1 Neighboring gene solute carrier family 2 member 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408595 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408595.1 Reference ChrAsi1.0 Primary Assembly

    Range
    2469227..2543258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006865297.1 → XP_006865359.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A9B0TPP3
    Conserved Domains (3) summary
    cd03223
    Location:478 → 683
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    TIGR00954
    Location:40 → 685
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    pfam06472
    Location:80 → 365
    ABC_membrane_2; ABC transporter transmembrane region 2

  2. XM_006865298.1 → XP_006865360.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A9B0TQZ2
    Conserved Domains (3) summary
    cd03223
    Location:480 → 685
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    TIGR00954
    Location:40 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    pfam06472
    Location:80 → 365
    ABC_membrane_2; ABC transporter transmembrane region 2
Nucleotide Protein
Heading Accession and Version

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