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PCDHAC2 protocadherin alpha subfamily C, 2 [ Myotis davidii ]

Gene ID: 102775112, updated on 30-Mar-2024

Summary

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Gene symbol
PCDHAC2
Gene description
protocadherin alpha subfamily C, 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PCDHAC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006300372.1 (32916..35240)

NW_006300372.1Genomic Context describing neighboring genes Neighboring gene protocadherin alpha subfamily C, 1 Neighboring gene protocadherin beta 1 Neighboring gene protocadherin beta-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006300372.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin alpha-C2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006300372.1 Reference ASM32734v1

    Range
    32916..35240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006777020.1 → XP_006777083.1  protocadherin alpha-C2

    Conserved Domains (3) summary
    cd11304
    Location:178 → 278
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam16492
    Location:620 → 725
    Cadherin_C_2; Cadherin cytoplasmic C-terminal
    cl09101
    Location:5 → 44
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
Nucleotide Protein
Heading Accession and Version

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