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SYNPO2L synaptopodin 2 like [ Myotis davidii ]

Gene ID: 102771631, updated on 30-Mar-2024

Summary

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Gene symbol
SYNPO2L
Gene description
synaptopodin 2 like
Locus tag
MDA_GLEAN10020890
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See SYNPO2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006288853.1 (6073304..6083636, complement)

NW_006288853.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 54 Neighboring gene myozenin 1 Neighboring gene SEC24 homolog C, COPII coat complex component Neighboring gene fucosyltransferase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006288853.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: synaptopodin 2-like protein
Names
Synaptopodin 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006288853.1 Reference ASM32734v1

    Range
    6073304..6083636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006761026.2 → XP_006761089.1  LOW QUALITY PROTEIN: synaptopodin 2-like protein

    Conserved Domains (1) summary
    cd00992
    Location:4 → 85
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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