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PCGF5 polycomb group ring finger 5 [ Myotis davidii ]

Gene ID: 102759905, updated on 30-Mar-2024

Summary

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Gene symbol
PCGF5
Gene description
polycomb group ring finger 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006284839.1 (2346327..2408130, complement)

NW_006284839.1Genomic Context describing neighboring genes Neighboring gene receptor tyrosine-protein kinase erbB-2 pseudogene Neighboring gene HECT domain E3 ubiquitin protein ligase 2 Neighboring gene asparagine synthetase [glutamine-hydrolyzing] pseudogene Neighboring gene uncharacterized LOC107181674 Neighboring gene ankyrin repeat domain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006284839.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group RING finger protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006284839.1 Reference ASM32734v1

    Range
    2346327..2408130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015558057.1 → XP_015413543.1  polycomb group RING finger protein 5 isoform X2

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 134
    rad18; DNA repair protein rad18
    cd16737
    Location:16 → 57
    RING-HC_PCGF5; RING finger found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
    cd17084
    Location:135 → 255
    RAWUL_PCGF5; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 5 (PCGF5) and similar proteins

  2. XM_015558063.1 → XP_015413549.1  polycomb group RING finger protein 5 isoform X4

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 135
    rad18; DNA repair protein rad18
    cd16737
    Location:16 → 57
    RING-HC_PCGF5; RING finger found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
    cl28922
    Location:136 → 223
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  3. XM_006755098.2 → XP_006755161.1  polycomb group RING finger protein 5 isoform X3

    See identical proteins and their annotated locations for XP_006755161.1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 135
    rad18; DNA repair protein rad18
    cd16737
    Location:16 → 57
    RING-HC_PCGF5; RING finger found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
    cd17084
    Location:136 → 236
    RAWUL_PCGF5; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 5 (PCGF5) and similar proteins

  4. XM_006755097.2 → XP_006755160.1  polycomb group RING finger protein 5 isoform X1

    See identical proteins and their annotated locations for XP_006755160.1

    Conserved Domains (3) summary
    TIGR00599
    Location:8 → 135
    rad18; DNA repair protein rad18
    cd16737
    Location:16 → 57
    RING-HC_PCGF5; RING finger found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
    cd17084
    Location:136 → 256
    RAWUL_PCGF5; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
Nucleotide Protein
Heading Accession and Version

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