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ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit [ Myotis davidii ]

Gene ID: 102753294, updated on 30-Mar-2024

Summary

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Gene symbol
ERCC1
Gene description
ERCC excision repair 1, endonuclease non-catalytic subunit
Locus tag
MDA_GLEAN10005785
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006287809.1 (111045..131298)

NW_006287809.1Genomic Context describing neighboring genes Neighboring gene reticulon 2 Neighboring gene FosB proto-oncogene, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC102752455 Neighboring gene RNA polymerase I subunit G Neighboring gene protein phosphatase 1 regulatory subunit 13 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006287809.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UV-damage excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ERCC4-ERCC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-1
Names
excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006287809.1 Reference ASM32734v1

    Range
    111045..131298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015561192.1 → XP_015416678.1  DNA excision repair protein ERCC-1

    UniProtKB/TrEMBL
    L5M553
    Conserved Domains (2) summary
    pfam03834
    Location:76 → 189
    Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
    pfam14520
    Location:215 → 267
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
Heading Accession and Version

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