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LOC102746841 DNA (cytosine-5)-methyltransferase 3-like [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102746841, updated on 11-Apr-2024

Summary

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Gene symbol
LOC102746841
Gene description
DNA (cytosine-5)-methyltransferase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006386225.1 (138495..156885)

NW_006386225.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 2-like Neighboring gene phosphofructokinase, liver type Neighboring gene inducible T cell costimulator ligand Neighboring gene PWP2 small subunit processome component

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006386225 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA (cytosine-5)-methyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006386225.1 Reference LepWed1.0 Primary Assembly

    Range
    138495..156885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031020300.1 → XP_030876160.1  DNA (cytosine-5)-methyltransferase 3-like

    UniProtKB/TrEMBL
    A0A7F8Q4G4
    Conserved Domains (1) summary
    cl28890
    Location:76 → 198
    FYVE_like_SF; FYVE domain like superfamily
Nucleotide Protein
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