U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102741177 zinc finger protein 805 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102741177, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102741177
Gene description
zinc finger protein 805
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Also known as
ZNF805
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102741177 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383426.1 (852465..879776, complement)

NW_006383426.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115940748 Neighboring gene zinc finger protein 543 Neighboring gene double homeobox protein A-like Neighboring gene small nucleolar RNA SNORA63

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006383426 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein 805

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383426.1 Reference LepWed1.0 Primary Assembly

    Range
    852465..879776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031027551.1 → XP_030883411.1  zinc finger protein 805 isoform X4

    UniProtKB/TrEMBL
    A0A7F8QRE6
    Conserved Domains (5) summary
    smart00349
    Location:15 → 75
    KRAB; krueppel associated box
    COG5048
    Location:231 → 450
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:205 → 227
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:447 → 468
    zf-H2C2_2; Zinc-finger double domain

  2. XM_031027548.1 → XP_030883408.1  zinc finger protein 805 isoform X2

    UniProtKB/TrEMBL
    A0A7F8QSX3
    Conserved Domains (5) summary
    smart00349
    Location:13 → 73
    KRAB; krueppel associated box
    COG5048
    Location:257 → 610
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:203 → 225
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:218 → 242
    zf-H2C2_2; Zinc-finger double domain

  3. XM_031027547.1 → XP_030883407.1  zinc finger protein 805 isoform X1

    UniProtKB/TrEMBL
    A0A7F8QQC6

  4. XM_031027550.1 → XP_030883410.1  zinc finger protein 805 isoform X3

    UniProtKB/TrEMBL
    A0A7F8QQG2
    Conserved Domains (4) summary
    COG5048
    Location:216 → 569
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:444 → 464
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:177 → 201
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:1 → 32
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

  5. XM_031027546.1 → XP_030883406.1  zinc finger protein 805 isoform X1

    UniProtKB/TrEMBL
    A0A7F8QQC6
    Conserved Domains (5) summary
    smart00349
    Location:15 → 75
    KRAB; krueppel associated box
    COG5048
    Location:259 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:487 → 507
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:205 → 227
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:220 → 244
    zf-H2C2_2; Zinc-finger double domain

  6. XM_031027549.1 → XP_030883409.1  zinc finger protein 805 isoform X3

    UniProtKB/TrEMBL
    A0A7F8QQG2
    Conserved Domains (4) summary
    COG5048
    Location:216 → 569
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:444 → 464
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:177 → 201
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:1 → 32
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.