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IRF3 interferon regulatory factor 3 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102732139, updated on 10-Mar-2024

Summary

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Gene symbol
IRF3
Gene description
interferon regulatory factor 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See IRF3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006386261.1 (234178..239937, complement)

NW_006386261.1Genomic Context describing neighboring genes Neighboring gene nitric oxide synthase interacting protein Neighboring gene proline rich and Gla domain 2 Neighboring gene proline rich 12 Neighboring gene BCL2 like 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006386261 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006386261.1 Reference LepWed1.0 Primary Assembly

    Range
    234178..239937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031020426.1 → XP_030876286.1  interferon regulatory factor 3 isoform X3

    UniProtKB/TrEMBL
    A0A7F8Q6Y5
    Conserved Domains (2) summary
    pfam00605
    Location:23 → 126
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 395
    IRF-3; Interferon-regulatory factor 3

  2. XM_031020423.1 → XP_030876283.1  interferon regulatory factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A7F8Q4U7
    Conserved Domains (2) summary
    pfam00605
    Location:7 → 110
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:201 → 366
    IRF-3; Interferon-regulatory factor 3

  3. XM_031020425.1 → XP_030876285.1  interferon regulatory factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A7F8Q4U7
    Conserved Domains (2) summary
    pfam00605
    Location:7 → 110
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:201 → 366
    IRF-3; Interferon-regulatory factor 3

  4. XM_031020424.1 → XP_030876284.1  interferon regulatory factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A7F8Q4U7
    Conserved Domains (2) summary
    pfam00605
    Location:7 → 110
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:201 → 366
    IRF-3; Interferon-regulatory factor 3

  5. XM_031020422.1 → XP_030876282.1  interferon regulatory factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A7F8Q4U0

  6. XM_031020427.1 → XP_030876287.1  interferon regulatory factor 3 isoform X4

    UniProtKB/TrEMBL
    A0A7F8Q4U5
    Conserved Domains (1) summary
    pfam10401
    Location:56 → 221
    IRF-3; Interferon-regulatory factor 3
Nucleotide Protein
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