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ezr ezrin [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102697135, updated on 2-Nov-2023

Summary

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Gene symbol
ezr
Gene description
ezrin
See related
Ensembl:ENSLOCG00000016372
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG1
Exon count:
16
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG1 NC_023179.1 (31207634..31241788)

Linkage Group LG1 - NC_023179.1Genomic Context describing neighboring genes Neighboring gene radial spoke head 3 Neighboring gene uncharacterized LOC107077706 Neighboring gene synaptotagmin-like 3 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023179.1 Chromosome LG1 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of early endosome to late endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein localization to early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of organelle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical part of cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in filopodium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ezrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023179.1 Reference LepOcu1 Primary Assembly

    Range
    31207634..31241788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006625919.2 → XP_006625982.2  ezrin isoform X1

    UniProtKB/TrEMBL
    W5NHV6, W5NHV7
    Conserved Domains (7) summary
    smart00295
    Location:7 → 206
    B41; Band 4.1 homologues
    cd13194
    Location:200 → 296
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00373
    Location:91 → 206
    FERM_M; FERM central domain
    pfam00769
    Location:338 → 584
    ERM; Ezrin/radixin/moesin family
    pfam09379
    Location:9 → 71
    FERM_N; FERM N-terminal domain
    cd16269
    Location:387 → 398
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:305 → 416
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_015350983.1 → XP_015206469.1  ezrin isoform X1

    UniProtKB/TrEMBL
    W5NHV6, W5NHV7
    Related
    ENSLOCP00000020215.1, ENSLOCT00000020249.1
    Conserved Domains (7) summary
    smart00295
    Location:7 → 206
    B41; Band 4.1 homologues
    cd13194
    Location:200 → 296
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00373
    Location:91 → 206
    FERM_M; FERM central domain
    pfam00769
    Location:338 → 584
    ERM; Ezrin/radixin/moesin family
    pfam09379
    Location:9 → 71
    FERM_N; FERM N-terminal domain
    cd16269
    Location:387 → 398
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:305 → 416
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. XM_015350991.1 → XP_015206477.1  ezrin isoform X1

    UniProtKB/TrEMBL
    W5NHV6, W5NHV7
    Conserved Domains (7) summary
    smart00295
    Location:7 → 206
    B41; Band 4.1 homologues
    cd13194
    Location:200 → 296
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00373
    Location:91 → 206
    FERM_M; FERM central domain
    pfam00769
    Location:338 → 584
    ERM; Ezrin/radixin/moesin family
    pfam09379
    Location:9 → 71
    FERM_N; FERM N-terminal domain
    cd16269
    Location:387 → 398
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:305 → 416
    GBP_C; Guanylate-binding protein, C-terminal domain

  4. XM_006625918.2 → XP_006625981.1  ezrin isoform X2

    Conserved Domains (5) summary
    cd13194
    Location:64 → 160
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00373
    Location:24 → 70
    FERM_M; FERM central domain
    pfam00769
    Location:202 → 448
    ERM; Ezrin/radixin/moesin family
    cd16269
    Location:251 → 262
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:169 → 272
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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