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josd1 Josephin domain containing 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102694764, updated on 10-Mar-2024

Summary

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Gene symbol
josd1
Gene description
Josephin domain containing 1
See related
Ensembl:ENSLOCG00000011543
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
4
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG12 NC_023190.1 (34673946..34677908)

Linkage Group LG12 - NC_023190.1Genomic Context describing neighboring genes Neighboring gene desumoylating isopeptidase 1a Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 6 Neighboring gene uncharacterized LOC107078857 Neighboring gene E1A binding protein p300 a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023190.1 Chromosome LG12 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
josephin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023190.1 Reference LepOcu1 Primary Assembly

    Range
    34673946..34677908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006636872.2 → XP_006636935.1  josephin-1

    UniProtKB/TrEMBL
    W5N0M2
    Related
    ENSLOCP00000014181.1, ENSLOCT00000014210.1
    Conserved Domains (1) summary
    pfam02099
    Location:50 → 202
    Josephin; Josephin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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