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abcb6a ATP binding cassette subfamily B member 6 (LAN blood group) a [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102694269, updated on 10-Mar-2024

Summary

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Gene symbol
abcb6a
Gene description
ATP binding cassette subfamily B member 6 (LAN blood group) a
See related
Ensembl:ENSLOCG00000000956
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Also known as
abcb6
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
21
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG2 NC_023180.1 (19091..48735, complement)

Linkage Group LG2 - NC_023180.1Genomic Context describing neighboring genes Neighboring gene adiponectin-like Neighboring gene uncharacterized LOC107079091

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023180.1 Chromosome LG2 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type heme transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family B member 6, mitochondrial
Names
ATP binding cassette subfamily B member 6 (Langereis blood group)
ATP-binding cassette, sub-family B (MDR/TAP), member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023180.1 Reference LepOcu1 Primary Assembly

    Range
    19091..48735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006626494.2 → XP_006626557.2  ATP-binding cassette sub-family B member 6, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W5LY71
    Conserved Domains (4) summary
    cd03253
    Location:582 → 817
    ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
    COG5265
    Location:321 → 816
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    pfam00664
    Location:269 → 536
    ABC_membrane; ABC transporter transmembrane region
    pfam16185
    Location:6 → 247
    MTABC_N; Mitochondrial ABC-transporter N-terminal five TM region

  2. XM_015360884.1 → XP_015216370.1  ATP-binding cassette sub-family B member 6, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W5LY71
    Related
    ENSLOCP00000001078.1, ENSLOCT00000001082.1
    Conserved Domains (4) summary
    cd03253
    Location:582 → 817
    ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
    COG5265
    Location:321 → 816
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    pfam00664
    Location:269 → 536
    ABC_membrane; ABC transporter transmembrane region
    pfam16185
    Location:6 → 247
    MTABC_N; Mitochondrial ABC-transporter N-terminal five TM region

  3. XM_015360889.1 → XP_015216375.1  ATP-binding cassette sub-family B member 6, mitochondrial isoform X2

    UniProtKB/TrEMBL
    W5LY71
    Conserved Domains (4) summary
    COG5265
    Location:321 → 706
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    pfam00664
    Location:269 → 536
    ABC_membrane; ABC transporter transmembrane region
    pfam16185
    Location:6 → 247
    MTABC_N; Mitochondrial ABC-transporter N-terminal five TM region
    cl21455
    Location:582 → 707
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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