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odf2l outer dense fiber of sperm tails 2 like [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102691024, updated on 2-Nov-2023

Summary

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Gene symbol
odf2l
Gene description
outer dense fiber of sperm tails 2 like
See related
Ensembl:ENSLOCG00000005283
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG10
Exon count:
20
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG10 NC_023188.1 (7652340..7670789)

Linkage Group LG10 - NC_023188.1Genomic Context describing neighboring genes Neighboring gene calcium-activated chloride channel regulator 4A-like Neighboring gene bloodthirsty-related gene family, member 32 Neighboring gene uncharacterized LOC107078366 Neighboring gene collagen type XXIV alpha 1 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023188.1 Chromosome LG10 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
outer dense fiber protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023188.1 Reference LepOcu1 Primary Assembly

    Range
    7652340..7670789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015355335.1 → XP_015210821.1  outer dense fiber protein 2-like isoform X1

    UniProtKB/TrEMBL
    W5MDA8, W5MDC3
    Related
    ENSLOCP00000006367.1, ENSLOCT00000006375.1
    Conserved Domains (1) summary
    TIGR02168
    Location:305 → 630
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_015355337.1 → XP_015210823.1  outer dense fiber protein 2-like isoform X2

    UniProtKB/TrEMBL
    W5MDC3
    Conserved Domains (1) summary
    TIGR02168
    Location:262 → 587
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_015355338.1 → XP_015210824.1  outer dense fiber protein 2-like isoform X3

    UniProtKB/TrEMBL
    W5MDC3
    Conserved Domains (2) summary
    COG1196
    Location:244 → 557
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:429 → 740
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
Nucleotide Protein
Heading Accession and Version

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