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acly ATP citrate lyase [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102685883, updated on 2-Nov-2023

Summary

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Gene symbol
acly
Gene description
ATP citrate lyase
See related
Ensembl:ENSLOCG00000012637
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG15
Exon count:
26
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG15 NC_023193.1 (5401093..5435931)

Linkage Group LG15 - NC_023193.1Genomic Context describing neighboring genes Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene 2',3'-cyclic nucleotide 3' phosphodiesterase Neighboring gene kelch-like family member 11 Neighboring gene kelch like family member 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023193.1 Chromosome LG15 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP citrate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023193.1 Reference LepOcu1 Primary Assembly

    Range
    5401093..5435931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015362116.1 → XP_015217602.1  ATP-citrate synthase

    UniProtKB/TrEMBL
    W5N4K7
    Related
    ENSLOCP00000015566.1, ENSLOCT00000015595.1
    Conserved Domains (7) summary
    cd06100
    Location:823 → 1060
    CCL_ACL-C; Citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL. CCL cleaves citryl-CoA (CiCoA) to acetyl-CoA (AcCoA) and oxaloacetate (OAA). ...
    PLN02235
    Location:1 → 361
    PLN02235; ATP citrate (pro-S)-lyase
    PLN02522
    Location:458 → 1061
    PLN02522; ATP citrate (pro-S)-lyase
    pfam16114
    Location:256 → 362
    Citrate_bind; ATP citrate lyase citrate-binding
    cl17255
    Location:55 → 207
    ATP-grasp_4; ATP-grasp domain
    cl21454
    Location:461 → 567
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl22543
    Location:627 → 752
    Ligase_CoA; CoA-ligase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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