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sumo3 small ubiquitin like modifier 3 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102682389, updated on 2-Nov-2023

Summary

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Gene symbol
sumo3
Gene description
small ubiquitin like modifier 3
See related
Ensembl:ENSLOCG00000009407
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG12
Exon count:
4
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG12 NC_023190.1 (22225946..22231699, complement)

Linkage Group LG12 - NC_023190.1Genomic Context describing neighboring genes Neighboring gene thrombospondin-type laminin G domain and EAR repeats b Neighboring gene ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) Neighboring gene PTTG1 interacting protein Neighboring gene myosin X, like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023190.1 Chromosome LG12 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ubiquitin-related modifier 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023190.1 Reference LepOcu1 Primary Assembly

    Range
    22225946..22231699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006636645.2 → XP_006636708.1  small ubiquitin-related modifier 3

    UniProtKB/TrEMBL
    W5MSX1
    Related
    ENSLOCP00000011480.1, ENSLOCT00000011497.1
    Conserved Domains (2) summary
    cd01763
    Location:7 → 92
    Sumo; Small ubiquitin-related modifier (SUMO)
    smart00213
    Location:17 → 85
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

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