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ttbk1 tau tubulin kinase 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102682254, updated on 2-Nov-2023

Summary

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Gene symbol
ttbk1
Gene description
tau tubulin kinase 1
See related
Ensembl:ENSLOCG00000015601
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG16
Exon count:
19
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG16 NC_023194.1 (3099933..3156897, complement)

Linkage Group LG16 - NC_023194.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich protein 3 Neighboring gene solute carrier family 22 member 7-like Neighboring gene solute carrier family 22 member 7-like Neighboring gene two pore segment channel 3 Neighboring gene post-GPI attachment to proteins GalNAc transferase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023194.1 Chromosome LG16 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-tyrosine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tau-tubulin kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023194.1 Reference LepOcu1 Primary Assembly

    Range
    3099933..3156897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015362502.1 → XP_015217988.1  tau-tubulin kinase 1 isoform X2

    UniProtKB/TrEMBL
    W5NEZ9
    Related
    ENSLOCP00000019210.1, ENSLOCT00000019242.1
    Conserved Domains (2) summary
    pfam00069
    Location:34 → 273
    Pkinase; Protein kinase domain
    cl21453
    Location:33 → 294
    PKc_like; Protein Kinases, catalytic domain

  2. XM_015362503.1 → XP_015217989.1  tau-tubulin kinase 1 isoform X2

    UniProtKB/TrEMBL
    W5NEZ9
    Conserved Domains (2) summary
    pfam00069
    Location:34 → 273
    Pkinase; Protein kinase domain
    cl21453
    Location:33 → 294
    PKc_like; Protein Kinases, catalytic domain

  3. XM_015362501.1 → XP_015217987.1  tau-tubulin kinase 1 isoform X1

    UniProtKB/TrEMBL
    W5NEZ9
    Conserved Domains (2) summary
    pfam00069
    Location:52 → 291
    Pkinase; Protein kinase domain
    cl21453
    Location:51 → 312
    PKc_like; Protein Kinases, catalytic domain

  4. XM_015362500.1 → XP_015217986.1  tau-tubulin kinase 1 isoform X1

    UniProtKB/TrEMBL
    W5NEZ9
    Conserved Domains (2) summary
    pfam00069
    Location:52 → 291
    Pkinase; Protein kinase domain
    cl21453
    Location:51 → 312
    PKc_like; Protein Kinases, catalytic domain

  5. XM_015362505.1 → XP_015217991.1  tau-tubulin kinase 1 isoform X3

    UniProtKB/TrEMBL
    W5NEZ9
    Related
    ENSLOCP00000019208.1, ENSLOCT00000019240.1
    Conserved Domains (2) summary
    pfam00069
    Location:52 → 291
    Pkinase; Protein kinase domain
    cl21453
    Location:51 → 312
    PKc_like; Protein Kinases, catalytic domain

  6. XM_015362504.1 → XP_015217990.1  tau-tubulin kinase 1 isoform X2

    UniProtKB/TrEMBL
    W5NEZ9
    Conserved Domains (2) summary
    pfam00069
    Location:34 → 273
    Pkinase; Protein kinase domain
    cl21453
    Location:33 → 294
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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