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B3GALT1 beta-1,3-galactosyltransferase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568197, updated on 6-Jun-2024

Summary

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Gene symbol
B3GALT1
Gene description
beta-1,3-galactosyltransferase 1
Locus tag
Y1Q_0011547
See related
EnsemblRapid:ENSAMIG00015025367
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (215226035..215629434, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714267.1 (12332655..12652302, complement)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 6 Neighboring gene serine/threonine kinase 39 Neighboring gene uncharacterized LOC132250401 Neighboring gene uncharacterized LOC132250400 Neighboring gene U5 spliceosomal RNA Neighboring gene xin actin binding repeat containing 2 Neighboring gene sodium channel protein type 2 subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    215226035..215629434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727312.1 → XP_059583295.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A151M047
    Related
    ENSAMIP00015034949.1, ENSAMIT00015048048.1

  2. XM_059727311.1 → XP_059583294.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A151M047
    Related
    ENSAMIP00015034948.1, ENSAMIT00015048047.1

  3. XM_059727313.1 → XP_059583296.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A151M047

  4. XM_059727315.1 → XP_059583298.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A151M047

  5. XM_059727314.1 → XP_059583297.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A151M047

RNA

  1. XR_009462108.1 RNA Sequence

  2. XR_009462109.1 RNA Sequence

  3. XR_009462110.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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