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GALC galactosylceramidase [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102522511, updated on 10-Mar-2024

Summary

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Gene symbol
GALC
Gene description
galactosylceramidase
Locus tag
CB1_001421002
See related
EnsemblRapid:ENSCFEG00005001485
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 6 NC_045701.1 (79996528..80053830, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006211596.1 (482034..536635, complement)

Chromosome 6 - NC_045701.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116664489 Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene uncharacterized LOC116664490 Neighboring gene G protein-coupled receptor 65

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactocerebrosidase
Names
Galactocerebrosidase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045701.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    79996528..80053830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032482465.1 → XP_032338356.1  galactocerebrosidase isoform X1

    UniProtKB/TrEMBL
    A0A8B8T7Y1
    Related
    ENSCFEP00005002169.1, ENSCFET00005002535.1
    Conserved Domains (2) summary
    pfam02057
    Location:55 → 349
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:357 → 463
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  2. XM_032482469.1 → XP_032338360.1  galactocerebrosidase isoform X4

    UniProtKB/TrEMBL
    A0A8B8T7Y4, S9XMR4
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  3. XM_032482468.1 → XP_032338359.1  galactocerebrosidase isoform X4

    UniProtKB/TrEMBL
    A0A8B8T7Y4, S9XMR4
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  4. XM_032482467.1 → XP_032338358.1  galactocerebrosidase isoform X3

    UniProtKB/TrEMBL
    A0A8B8T8W7
    Conserved Domains (2) summary
    pfam02057
    Location:21 → 262
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:270 → 376
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  5. XM_014564479.2 → XP_014419965.1  galactocerebrosidase isoform X4

    UniProtKB/TrEMBL
    A0A8B8T7Y4, S9XMR4
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  6. XM_014564478.2 → XP_014419964.1  galactocerebrosidase isoform X4

    UniProtKB/TrEMBL
    A0A8B8T7Y4, S9XMR4
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  7. XM_032482466.1 → XP_032338357.1  galactocerebrosidase isoform X2

    UniProtKB/TrEMBL
    A0A8B8T8G3
    Conserved Domains (2) summary
    pfam02057
    Location:39 → 322
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:330 → 436
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain
Nucleotide Protein
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