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SLITRK6 SLIT and NTRK like family member 6 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102521253, updated on 10-Mar-2024

Summary

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Gene symbol
SLITRK6
Gene description
SLIT and NTRK like family member 6
Locus tag
CB1_001057001
See related
EnsemblRapid:ENSCFEG00005022521
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See SLITRK6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 14 NC_045709.1 (43936062..43943501)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006211232.1 (227195..233810)

Chromosome 14 - NC_045709.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA71 Neighboring gene uncharacterized LOC116668691 Neighboring gene uncharacterized LOC116668690 Neighboring gene uncharacterized LOC116668500 Neighboring gene uncharacterized LOC116668696 Neighboring gene SLIT and NTRK like family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLIT and NTRK-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045709.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    43936062..43943501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006188003.2 → XP_006188065.2  SLIT and NTRK-like protein 6

    UniProtKB/TrEMBL
    A0A8B6YMA0
    Related
    ENSCFEP00005038006.1, ENSCFET00005042114.1
    Conserved Domains (6) summary
    smart00082
    Location:519 → 569
    LRRCT; Leucine rich repeat C-terminal domain
    sd00031
    Location:368 → 389
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:96 → 115
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:390 → 447
    LRR_8; Leucine rich repeat
    cd21340
    Location:347 → 520
    PPP1R42; protein phosphatase 1 regulatory subunit 42
    cl15307
    Location:220 → 270
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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