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PKP2 plakophilin 2 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102519320, updated on 10-Mar-2024

Summary

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Gene symbol
PKP2
Gene description
plakophilin 2
Locus tag
CB1_000731033
See related
EnsemblRapid:ENSCFEG00005021372
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See PKP2 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
13
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 34 NC_045729.1 (822491..896932)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210907.1 (3608798..3668182, complement)

Chromosome 34 - NC_045729.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116661377 Neighboring gene uncharacterized LOC116661378 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene tyrosyl-tRNA synthetase 2 Neighboring gene dynamin 1 like Neighboring gene FYVE, RhoGEF and PH domain containing 4 Neighboring gene 60S acidic ribosomal protein P1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intermediate filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase C binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in desmosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intercalated disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plakophilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045729.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    822491..896932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032473502.1 → XP_032329393.1  plakophilin-2

    UniProtKB/TrEMBL
    A0A8B8SGM7
    Related
    ENSCFEP00005036016.1, ENSCFET00005039928.1
    Conserved Domains (3) summary
    PLN03200
    Location:321 → 478
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:347 → 374
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:379 → 417
    Arm; Armadillo/beta-catenin-like repeat
Nucleotide Protein
Heading Accession and Version

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